When I need to be really sure that the water I am drinking is free from bugs and germs and other little nasties, I boil it. I don't boil for a long period, just get it to a nice rolling boil and then use. I have successfully treated some very ugly water sources this way. I stockpile genrous quantities of fuel, mostly propane, for this eventuality in an emergency.<br><br>A few years ago, the city fathers announced that, effective immediately, tap water should be boiled. It was an interesting experience. The stores immediately sold out their water supplies. We were able to boil all we needed for consumption - the incident complicated life for a bit, but everything worked out fine.<br><br>I would make the working assumption, following an earthquake, that water supplies would not be potable, and I would boil, whether or not the authorities made an official announcement.<br><br>Interesting experience you are having with the commercial 2.5 gal containers. I have never felt that they were very suitable for storage. In an emergency, I would boil the "moldy" water and use it. If I had better water, I would use it first for drinking.<br><br>I have a filter, and I use it often when backpacking. In my experience, they work fine when you are concerned with giardia and other bacteria. Some models, with silver iodide, are apparently effective against viruses. In a tough situation, like an urban disaster, boiling is simpler and protects against a wider range of problems.<br>