...then rebuild the ecosystem to deal with what's left...
This is what I was wondering about when they starting pumping all that garbage out of NO.  Didn't seem like a terribly good idea to put it back in nearby lakes, but I can't say I have a better idea.  Draining the flooded city seemed to be a top priority, but I don't understand why.  Reports were that everything was totally destroyed anyway.  But trying to treat all that polluted water would have been nearly impossible, so what else could have been done?