Recycling random plastic bits for a 3D printer is not an easy task. The resulting filament must be extremely uniform, otherwise your print layers wouldn't stick. However, for a manual pen that could be amended by constant visual adhesion monitoring and adjustment - no doubt, that will eventually come with practice.
For an abstract survival use... I'd opt for a glue gun or even a soldering iron anyway, as they're way more reliable, especially if you plan to feed them with random plastic garbage and use in survival settings for tough equipment improvisation
All you need to improve on a small glue gun and a powerfull iron is to add a temperature regulator and an interchangeable nozzles receptacle, so you can adjust the base material type and the walls/elements thickness as the job might dictate.
In my survival toolbox I have a small propane/butane torch/soldering iron with several knives and heating nozzles of various forms, similar to this one:
http://www.ebay.com/itm/10-in-1-Professi...K-/371134778692 Plus a piece of thick steel wire to improvise custom shapes. It helps to work with various plastics, tin, and glass very efficiently - what should cover most of the survival preps tasks you have outlined above and many more of those a pen cannot handle. It's also a fantastic lighter for your emergency fire, even out of wet wood.
A typical 3D pen, on other hand, works with a specific plastic type only (I suspect 3D pen is just a smart way to sell cheap plastic 10-20 times above it's actual price, as it must come from the pen manufacturer and its affiliates only to maintain the warranty), so you cannot use just any plastic with it without serious modifications. Even the same plastic, after the initial melting will behave differently after re-melting. Too high temp for the particular plastic's sweet-spot and it starts bubbling, thus interfering with extrusion; or "aching", making the result brittle or not adhesive, contaminating the nozzle or the extruding mechanism; too low - inadequate adhesion again, uneven layers, cool-down delamination, or clogging the nozzle too. Moisture absorbed in the filament? Foreign solid particles on the filament surface or within? - More problems with the process and with the result. I'm observing all these effects on my table printer daily and it took a lot of time to tune up the software and the setup itself in order to produce really usable, repeatable, sturdy things on each overnight run. A pen does not provide much of adjustments if any at all.